reverse_cuthill_mckee_ordering¶

reverse_cuthill_mckee_ordering(G, heuristic=None)[source]¶

Generate an ordering (permutation) of the graph nodes to make a sparse matrix.

Uses the reverse Cuthill-McKee heuristic (based on breadth-first search) [R334].

Parameters :	G : graph A NetworkX graph heuristic : function, optional Function to choose starting node for RCM algorithm. If None a node from a psuedo-peripheral pair is used. A user-defined function can be supplied that takes a graph object and returns a single node.
Returns :	nodes : generator Generator of nodes in reverse Cuthill-McKee ordering.

See also

cuthill_mckee_ordering

Notes

The optimal solution the the bandwidth reduction is NP-complete [R335].

References

[R334]

(1, 2) E. Cuthill and J. McKee. Reducing the bandwidth of sparse symmetric matrices, In Proc. 24th Nat. Conf. ACM, pages 157-72, 1969. http://doi.acm.org/10.1145/800195.805928

[R335]

(1, 2) Steven S. Skiena. 1997. The Algorithm Design Manual. Springer-Verlag New York, Inc., New York, NY, USA.

Examples

>>> from networkx.utils import reverse_cuthill_mckee_ordering
>>> G = nx.path_graph(4)
>>> rcm = list(reverse_cuthill_mckee_ordering(G))
>>> A = nx.adjacency_matrix(G, nodelist=rcm) 

Smallest degree node as heuristic function:

>>> def smallest_degree(G):
...     node,deg = sorted(G.degree().items(), key = lambda x:x[1])[0]
...     return node
>>> rcm = list(reverse_cuthill_mckee_ordering(G, heuristic=smallest_degree))